#!/bin/bash
#SBATCH --job-name=caster-job          
#SBATCH --partition=batch
#SBATCH --nodes=1                       
#SBATCH --ntasks=1                      
#SBATCH --cpus-per-task=9     
#SBATCH --time=01:00:00                             
#SBATCH --output=caster.out

CASTER_ROOT=/mnt/apps/custom/CASTER/v1.24

$CASTER_ROOT/bin/caster-site -t $SLURM_CPUS_PER_TASK -o my_output_tree.nw genetrees.tre_1.fas